{"id":2782,"date":"2013-11-13T20:52:06","date_gmt":"2013-11-14T01:52:06","guid":{"rendered":"http:\/\/rud.is\/b\/?p=2782"},"modified":"2017-04-02T22:51:56","modified_gmt":"2017-04-03T03:51:56","slug":"visual-anatomy-of-r-packages-used-in-data-driven-security","status":"publish","type":"post","link":"https:\/\/rud.is\/b\/2013\/11\/13\/visual-anatomy-of-r-packages-used-in-data-driven-security\/","title":{"rendered":"Visual Anatomy Of R Packages Used in Data Driven Security"},"content":{"rendered":"

Since @jayjacobs & I are down to the home stretch on Data Driven Security<\/a>, I thought it would be interesting to do some post-writing pseudo-analyses of the book itself. I won’t have exact page or word counts for a bit, but I wanted to see how many R packages we ended up relying on for the examples in the chapters. It was fairly straightforward to run a grep<\/code> for calls to library()<\/code> or require()<\/code> across all the source files, and I grouped the results into four categories: “analysis”, “core”, “munging” and “visualization”.<\/p>\n

Since I <3 D3 circular dendrograms, I figured that would be a fun way to show the groupings. For those who dislike spinning your noggin around, a more traditional one is also presented. You'll need an SVG-capable browser to see the visualizations (below). Stay on the lookout for more \"behind the scenes\" posts.\n\n

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<\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/path><\/circle><\/text><\/g><\/circle>visualization<\/text><\/g><\/circle>aplpack<\/text><\/g><\/circle>colorspace<\/text><\/g><\/circle>ggdendro<\/text><\/g><\/circle>ggplot2<\/text><\/g><\/circle>ggthemes<\/text><\/g><\/circle>gridExtra<\/text><\/g><\/circle>igraph<\/text><\/g><\/circle>maps<\/text><\/g><\/circle>maptools<\/text><\/g><\/circle>RColorBrewer<\/text><\/g><\/circle>vcd<\/text><\/g><\/circle>analysis<\/text><\/g><\/circle>binom<\/text><\/g><\/circle>car<\/text><\/g><\/circle>effects<\/text><\/g><\/circle>portfolio<\/text><\/g><\/circle>splines<\/text><\/g><\/circle>scales<\/text><\/g><\/circle>verisr<\/text><\/g><\/circle>zoo<\/text><\/g><\/circle>rgdal<\/text><\/g><\/circle>core<\/text><\/g><\/circle>devtools<\/text><\/g><\/circle>stats<\/text><\/g><\/circle>munging<\/text><\/g><\/circle>bitops<\/text><\/g><\/circle>gdata<\/text><\/g><\/circle>reshape<\/text><\/g><\/circle>plyr<\/text><\/g><\/circle>rjson<\/text><\/g><\/circle>RJSONIO<\/text><\/g><\/g><\/svg><\/center><\/p>\n","protected":false},"excerpt":{"rendered":"

Since @jayjacobs & I are down to the home stretch on Data Driven Security, I thought it would be interesting to do some post-writing pseudo-analyses of the book itself. I won’t have exact page or word counts for a bit, but I wanted to see how many R packages we ended up relying on for […]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"jetpack_post_was_ever_published":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":true,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"activitypub_content_warning":"","activitypub_content_visibility":"","activitypub_max_image_attachments":3,"activitypub_interaction_policy_quote":"anyone","activitypub_status":"","footnotes":""},"categories":[677,709,678,673,674,36],"tags":[],"class_list":["post-2782","post","type-post","status-publish","format-standard","hentry","category-data-analysis-2","category-data-driven-security","category-data-visualization","category-datavis-2","category-dataviz","category-html5"],"yoast_head":"\nVisual Anatomy Of R Packages Used in Data Driven Security - rud.is<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/rud.is\/b\/2013\/11\/13\/visual-anatomy-of-r-packages-used-in-data-driven-security\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Visual Anatomy Of R Packages Used in Data Driven Security - rud.is\" \/>\n<meta property=\"og:description\" content=\"Since @jayjacobs & I are down to the home stretch on Data Driven Security, I thought it would be interesting to do some post-writing pseudo-analyses of the book itself. 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Using `t` frees R code from having to be a Twitter processor and lets the analyst focus on analysis and visualization,\u2026","rel":"","context":"In "Data Analysis"","block_context":{"text":"Data Analysis","link":"https:\/\/rud.is\/b\/category\/data-analysis-2\/"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":2896,"url":"https:\/\/rud.is\/b\/2014\/02\/09\/data-driven-security-roundup-betapert-shiny-honeypots-passwords-reproducible-research\/","url_meta":{"origin":2782,"position":1},"title":"Data Driven Security Roundup: betaPERT, Shiny, Honeypots, Passwords & Reproducible Research","author":"hrbrmstr","date":"2014-02-09","format":false,"excerpt":"Jay Jacobs (@jayjacobs)\u2014my co-author of the soon-to-be-released book [Data-Driven Security](http:\/\/amzn.to\/ddsec)\u2014& I have been hard at work over at the book's [sister-blog](http:\/\/dds.ec\/blog) cranking out code to help security domain experts delve into the dark art of data science. We've covered quite a bit of ground since January 1st, but I'm using\u2026","rel":"","context":"In "Data Analysis"","block_context":{"text":"Data Analysis","link":"https:\/\/rud.is\/b\/category\/data-analysis-2\/"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":2190,"url":"https:\/\/rud.is\/b\/2013\/02\/27\/follow-upresources-grc-t18-data-analysis-and-visualization-for-security-professionals-rsac\/","url_meta":{"origin":2782,"position":2},"title":"Follow up\/Resources :: GRC-T18 \u2013 Data Analysis and Visualization for Security Professionals #RSAC","author":"hrbrmstr","date":"2013-02-27","format":false,"excerpt":"Many thanks to all who attended the talk @jayjacobs & I gave at RSA on Tuesday, February 26, 2013. It was really great to be able to talk to so many of you afterwards as well. We've enumerated quite a bit of non-slide-but-in-presentation information that we wanted to aggregate into\u2026","rel":"","context":"In "Charts & Graphs"","block_context":{"text":"Charts & Graphs","link":"https:\/\/rud.is\/b\/category\/charts-graphs\/"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":2912,"url":"https:\/\/rud.is\/b\/2014\/02\/12\/one-more-yet-another-olympic-medal-live-tracking-shiny-app\/","url_meta":{"origin":2782,"position":3},"title":"One More (Yet-another?) Olympic Medal Live-tracking Shiny App","author":"hrbrmstr","date":"2014-02-12","format":false,"excerpt":"I'm posting this mostly to show how to: - use the Google spreadsheet data-munging \"hack\" from the [previous post](http:\/\/rud.is\/b\/2014\/02\/11\/live-google-spreadsheet-for-keeping-track-of-sochi-medals\/) in a Shiny context - include it seamlessly into a web page, and - run it locally without a great deal of wrangling The code for the app is [in this\u2026","rel":"","context":"In "data driven security"","block_context":{"text":"data driven security","link":"https:\/\/rud.is\/b\/category\/data-driven-security\/"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":2871,"url":"https:\/\/rud.is\/b\/2014\/01\/06\/announcing-the-launch-of-the-data-driven-security-blogpodcast\/","url_meta":{"origin":2782,"position":4},"title":"Announcing The Launch Of The Data Driven Security [Blog|Podcast]","author":"hrbrmstr","date":"2014-01-06","format":false,"excerpt":"While you're waiting for the [book](http:\/\/amzn.to\/ddsec) by @jayjacobs & @hrbrmstr to hit the shelves, why not head on over to the inaugural post of the [Data Driven Security Blog](http:\/\/datadrivensecurity.info\/blog) & give a listen to the first episode of the [Data Driven Security Podcast](http:\/\/datadrivensecurity.info\/podcast). The Data Driven Security Blog aspires to\u2026","rel":"","context":"In "Data Analysis"","block_context":{"text":"Data Analysis","link":"https:\/\/rud.is\/b\/category\/data-analysis-2\/"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]},{"id":2465,"url":"https:\/\/rud.is\/b\/2013\/04\/18\/sourceboston2013\/","url_meta":{"origin":2782,"position":5},"title":"SOURCE Boston (@SOURCEConf) Data Analysis & Visualization Talk Resources #srcbos13","author":"hrbrmstr","date":"2013-04-18","format":false,"excerpt":"Many thanks to all who attended the talk @jayjacobs & I gave at @SOURCEconf on Thursday, April 18, 2013. As promised, here are the [slides](https:\/\/dl.dropboxusercontent.com\/u\/43553\/SOURCE-Boston-2013.pdf) which should be much less washed out than the projector version :-) We've enumerated quite a bit of non-slide-but-in-presentation information that we wanted to aggregate\u2026","rel":"","context":"In "Big Data"","block_context":{"text":"Big Data","link":"https:\/\/rud.is\/b\/category\/big-data\/"},"img":{"alt_text":"","src":"","width":0,"height":0},"classes":[]}],"jetpack_sharing_enabled":true,"_links":{"self":[{"href":"https:\/\/rud.is\/b\/wp-json\/wp\/v2\/posts\/2782","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/rud.is\/b\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/rud.is\/b\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/rud.is\/b\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/rud.is\/b\/wp-json\/wp\/v2\/comments?post=2782"}],"version-history":[{"count":0,"href":"https:\/\/rud.is\/b\/wp-json\/wp\/v2\/posts\/2782\/revisions"}],"wp:attachment":[{"href":"https:\/\/rud.is\/b\/wp-json\/wp\/v2\/media?parent=2782"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/rud.is\/b\/wp-json\/wp\/v2\/categories?post=2782"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/rud.is\/b\/wp-json\/wp\/v2\/tags?post=2782"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}